Plant GARDEN How To ▶︎

JA

EN

Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869089.1_cds_XP_016433656.1_29793

CDS Infomation

[gene=LOC107760155] [db_xref=GeneID:107760155] [protein=LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 53 A] [transl_except=(pos:574..576,aa:Other)] [protein_id=XP_016433656.1] [location=complement(join(2228..2530,3108..3203,3298..3366,3873..3935,4156..4233,4369..4462,4544..4677,4756..4833,5128..5193,5281..5388,5880..5957,6203..6262,6344..6448,7070..7111,7215..7400,12527..12590,13058..13199,13302..13620,14838..14914,16757..16907,17064..17120,18429..18523,21062..21119))] [gbkey=CDS]

Sequence

ATGGCGACATCCGATAAGCAGAACACGTTGGATTACATCAACCAGATGTTTCCCACTGAA
GCATCTCTATCTGGCGTTGAGCCCCTTATGCAGAAGATACATAGTGAAATTCGTCGTGTT
GATGCTGAAATACTGACTGCTGTTCGGCAACAGAGTAATTCTGGAACCAAAGCCAGAGAA
GATCTTGCTGCAGCTACGAGTGCTGTGCAGGAACTCATGAATAAGATTCGAGAAATTAAA
ACCAAAGCAGAGCAAAGTGAAACAATGGTTCAAGAAATATGTCGCGATATTAAAAAATTG
GATTTTGCAAAGAAGCACATAACAACCACAATTACTGCCCTTCACCGCCTTACCATGCTA
GTTTCTGCGGTAGAGCAACTTCAAGTAATGGCATCAAAACGTCACTATAAAGAGGCAGCT
GCACAGCTTGAGGTATTTATACTTGTAATTAGAAAAAAAATAATGACAAAAGATACAGAG
TTTTATTCTGATATTTTTCAAGAAATGAATAAAGTGAAAGTTCCAGTTTGGATTTTTTGC
ATGTCTTTTTTCCTTCTTGTTTCCATGGTCTTTTAACTTCCTTTCGTCGCTTACAGCTTA
GGCACAGGGAAGGAGACAGAAGAAAGCAATCTACTACAGCAGTTATCAGATTCATGCTTA
GTTGTTGATGCTCTCGAACCTTCTGTTAGAGAAGAATTGGTGAAAATTTTTTGTAATAGA
GAGCTTACCTCGTACCAGCAGATTTTTGAAGGAGCAGAACTAGCTAAGTTGGACAAGACT
GAAAGAAGATATGCTTGGATCAAGCGTCGTCTAAGAACAAATGAGGAGATTTGGAAAATT
TTCCCTCGTTCATGGCATGTGGATTATTTGCTTTGTATCCAGTTCTGCAAGTTGACAAGG
TCTCAACTTGTGGAAATCCTTGTTAGTATGAAAGAAAAGCCAGATGTTGCGACCTTGTTG
ATGGCTCTGCAGCGTACTTTGGAATTTGAAGAGGAGTTAGCAGAGAAATTTGGTGGTGGA
ACCCGCAGTAAAGATGCTGTAGATGACAATGAAGAAACAGAAAGGAGCGGAAAAAAGAGC
CAGACAGTTTCAGACATTCGGAAAAAATATGAGAAAAAGCTTGCTGCTCATGATGGTAGT
CAACATGACGAACAAGATGGACAAAAAGATTCATCAGTGCCGGGAGCTGGGTTCAATTTC
CGAGGGATCATTTCATCGTGCTTTGAACCTCACTTGTCAGTTTATGTAGAGCTAGAAGAG
AAGACTCTTATGGACAGTTTGGAGAAAGAAATGCCGGAAGAGACGTGGGAAATTGAGGAG
GGAAGTCAGACTAATATTTTATCTAGCAGCATTAAGGTCTTTGTAATCATCAGGAGGAGC
TTGAAGCGATGCAGTGCTTTGACGAAAAACCAGACATTGTTTAATCTCTTTAAGGCATTT
CAAAAAGTTCTTAAAGCTTATGCTACCAAGCTTTTCTCTAGATTGCCAAAGGGTGGTTCA
GGAATTGTTGCAGCTGCCACGGGTATTGAAGGACAGATAAAGACATCGGACAAGGATGAA
AGGGTGATCTGCTACATAGTAAATACTGCAGAGTATTGTCACAAAACGTGTGGTGAATTA
GCAGATAATGTCTCAAAGATGATTGATGCTCAATTTGCAGATAGAGTGGATATGTCTGAA
GTACAGGATGAATTTTCAGCAGTTATTACAAAATCATTGATTACACTAGTGCACGGAATA
GAAACAAAGTTTGACTCTGAGATGGCTGCAATGACTCGTGTTCCGTGGAGTACTCTTGAA
AGTGTTGGTGATCAGTCAGAGTACGTCAATGGCATAAATTCGATCCTTACCAGTAGCATT
CCTGTGCTCGGAAGCCTTCTCTCTCCGATTTACTTCCAATTCTTTCTGGATAAGCTTGCG
TCGTCTCTCGGTCCACGGTTCTTTCACAATATATTCAAATGCAAACAGATTTCAGAGACT
GGAGCACAGCAAATGCTTTTGGATACGCAAGCAGTAAAGACTATTTTGCTGGAAATTCCT
TCACTTGGAAAACAAACAGCGGGAGCTGCTAGCTATTCTAAATTTGTCAGTCGTGAGATG
AGCAAAGCAGAAGCATTATTGAAGGTCATACTATCTCCAATAGATTCTGTGGCAGACACA
TACTGTGCACTGCTGCCAGAGGGAACACTTGCAGAATTTCAGCGGCTTTTGGAGCTTAAG
GGCCTGAAAAAAGCTGATCAGCAGAGCATACTGGATGACTTCAACAAACGTGGGTCAGGT
ATCTCTCAGCCGACCATTATGGCCCCTTCAGTTGTACCATCTGCTCCAAACACCTCAATA
GCACCGGCCATAACTAACGCAGCATCATCACCTGGGGCCATCACTTCAAGAGAAGATGTG
CTGACCAGAGCAGCTGCACTTGGAAGAGGTGCAGCTACTACTGGCTTTAAGAGATTCCTC
GCTTTAACAGAAGCTGCAAAAGATCGCAAGGATGGGCCATTCAGGAAGCTATTCAATGGA
TAA

Peptide Sequence

PEP ID

XP_016433656.1

PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 53 A [Nicotiana tabacum]

Sequence

MATSDKQNTLDYINQMFPTEASLSGVEPLMQKIHSEIRRVDAEILTAVRQQSNSGTKARE
DLAAATSAVQELMNKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQVMASKRHYKEAAAQLEVFILVIRKKIMTKDTEFYSDIFQEMNKVKVPVWIFC
MSFFLLVSMVFXLPFVAYSLGTGKETEESNLLQQLSDSCLVVDALEPSVREELVKIFCNR
ELTSYQQIFEGAELAKLDKTERRYAWIKRRLRTNEEIWKIFPRSWHVDYLLCIQFCKLTR
SQLVEILVSMKEKPDVATLLMALQRTLEFEEELAEKFGGGTRSKDAVDDNEETERSGKKS
QTVSDIRKKYEKKLAAHDGSQHDEQDGQKDSSVPGAGFNFRGIISSCFEPHLSVYVELEE
KTLMDSLEKEMPEETWEIEEGSQTNILSSSIKVFVIIRRSLKRCSALTKNQTLFNLFKAF
QKVLKAYATKLFSRLPKGGSGIVAAATGIEGQIKTSDKDERVICYIVNTAEYCHKTCGEL
ADNVSKMIDAQFADRVDMSEVQDEFSAVITKSLITLVHGIETKFDSEMAAMTRVPWSTLE
SVGDQSEYVNGINSILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFFHNIFKCKQISET
GAQQMLLDTQAVKTILLEIPSLGKQTAGAASYSKFVSREMSKAEALLKVILSPIDSVADT
YCALLPEGTLAEFQRLLELKGLKKADQQSILDDFNKRGSGISQPTIMAPSVVPSAPNTSI
APAITNAASSPGAITSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNG

Transcript Sequence

Gene sequence data has not been registered.